Primetta Faccioli



Consiglio per la Ricerca e la Sperimentazione in Agricoltura
Genomics Research Centre
via S. Protaso, 302
I -29017 Fiorenzuola d'Arda PC, Italy
primetta.faccioli@crea.gov.it


Curriculum vitae
Primetta has over 20 years experience in plants genetics. Much of her earlier work has been devoted to the study of genes involved in plant development and to the application of molecular markers to cultivar fingerprinting, phylogenesis and food ingredients traceability. In the last 10 years she has been involved in the analysis of gene expression using advanced approaches based on the integration of "in silico" and "wet" biology. From 2004 she has moved from the laboratory to the computer room to apply computational biology techniques to the study of complex regulatory circuits involved in the control of gene expression.

Current research interests
Computational analysis of microRNA targets. Study of complex regulatory circuits involving microRNAs and transcription factors. Identification and analysis of microRNA coding genes.

Selected recent publications

  1. Colaiacovo M., Faccioli P. Approaches to plant microRNAs - identification of microRNAs and their targets using bioinformatic tools, in Poltronieri P., Burbulis N., Fogher C. (Editors). "From plant genomics to plant biotechnology". Woodhead Publishing, Cambridge, UK (in press.).
  2. Colaiacovo M., Lamontanara A., Beranrdo L., Alberici R., Crosatti C., Giusti L., Cattivelli L., Faccioli P. (2012) On the complexity of miRNA-mediated regulation in plants: novel insights into the genomic organization of plant miRNAs. BMC Biology Direct 7:15.
  3. Colaiacovo M., Bernardo L., Centomani I., Crosatti C., Giusti L., Orrù L., Tacconi G., Lamontanara A., Cattivelli L., Faccioli P. (2012) A survey of microRNA length variants contributing to miRNome complexity in peach (Prunus persica L.). Frontiers in Plant Science 3:165.
  4. Vitulo N., Albiero A., Forcato C., Campagna D., Dal Pero F., Bagnaresi P., Colaiacovo M., Faccioli P., Lamontanara A., Simkova H., Kubalakova M., Perrotta G., Facella P., Lopez L., Pietrella M., Gianese G., Dolezel J., Giuliano G., Cattivelli L., Valle G., Stanca A.M. (2011) First survey of the wheat chromosome 5A composition through a next-generation sequencing approach, PloS ONE 6(10):e26421.
  5. Colaiacovo M., Subacchi A., Bagnaresi P., Lamontanara A., Cattivelli L., Faccioli P. (2010) A computational-based update on microRNAs and their targets in barley (Hordeum vulgare L.). BMC Genomics 11:595.
  6. Terzi V., Morcia C:, Spini M., Tudisco R., Cutrognelli M.I., Infascelli F., Stanca A.M., Faccioli P. (2010) Identification and validation of reference genes for gene expression studies in Water Buffalo. Animal 4: 853-860
  7. Fricano A., Rizza F. Faccioli P., Pagani D., Pavan P., Stella A., Rossini L., Piffanelli P., Cattivelli L. (2009) Genetic variants Of Hvcbf14 are statistically associated with frost tolerance in a european germplasm collection of Hordeum. Vulgare. Theoretical And Applied Genetics 119(7): 1335-1348.
  8. Rossi V., Terzi V., Moggi F., Morcia C., Faccioli P., Haidukowski M., Pascale M (2007) Assessment of Fusarium infection in wheat heads using a quantitative Polymerase Chain Reaction (QPCR) Assay. Food Additives & Contaminants 24 (10): 1121-1130.
  9. Terzi V., Morcia C., Faccioli P., Vale’ G., Tacconi G., Malnati M. (2007) In Vitro antifungal activity of the Tea Tree (Melaleuca Alternifolia) essential oil and its major components against plant pathogens. Letters In Applied Microbiology (Lam) 44:613-618.
  10. Terzi V., Morcia C., Stanca A.M., Kucera L., Fares C., Codianni P., Di Fonzo N., Faccioli P.(2007) Assessment of genetic diversità in emmer (Triticum dicoccon Schrank) x durum wheat (Triticum durum Desf.) derived lines and their parents using mapped and unmapped molecolar markers. Genetic Resources and Crop Evolution 54(7): 1613-1621.
  11. Faccioli P., Ciceri G.P., Provero P., Stanca A.M., Terzi V. (2007) A combined strategy of in silico transcriptome analysis and web search engine optimization allows an agile identification of reference genes suitable for normalization in gene expression studies. Plant Molecular Biology 63:679-688.
  12. Terzi V., Morcia C., Gorrini A., Stanca A.M., Shewry P., Faccioli P. (2005). DNA-based methods for identification and quantification of small grain cereal mixtures and fingerprinting of varieties. Journal of Cereal Science, 41: 213-220 (Review)
  13. Terzi V., Pastori G., Shewry Pr., Di Fonzo N., Stanca A.M., Faccioli P. (2005) Real time PCR assisted selection of wheat plants transformed with HMW glutenin subunit genes. Journal of Cereal Science, 41: 133-136.
  14. Faccioli P., Provero P., Herrmann K., Stanca A.M., Morcia C., Terzi V. (2005) From single genes to co-expression network: extracting knowledge from barley functional genomics. Plant Molecular Biology, 58 (5): 739-750.
  15. Terzi V.,Infascelli F., Tudisco R., Russo G., Stanca A.M., Faccioli P. 2004. Quantitative detection of Secale cereale by real time PCR amplification. Food Science and Technology (LWT):37:239-246.
  16. Atienza S.G., Faccioli P., Perrotta G., Dalfino G., Zschiesche W., Humbeck K., Stanca A.M., Cattivelli L. (2004) Large scale analysis of transcripts abundance in barley subjected to several single and combined abiotic stress conditions. Plant science 167/6: 1359-1365.
  17. Terzi V., M. Malnati, M. Barbanera, A.M. Stanca, P. Faccioli (2003). Development of analytical systems based on real time PCR for Triticum species-specific detection and quantitation of bread wheat contamination in semolina and pasta. Journal of Cereal Science 38: 87-94.
  18. Terzi V., Ferrari B., F. Finocchiaro, N. Di Fonzo, C. Lamacchia, J. Napier, P.R. Shewry, P. Faccioli (2003). TaqMan PCR for detection of genetically modified durum wheat. Journal of Cereal Science, 37: 157-163.
  19. Faccioli P., Lagonigro M.S., De Cecco L., Stanca A.M., Alberici R., Terzi V. (2002) Analysis of differential expression of barley ESTs during cold acclimatization using microarray technology. Plant Biology, 4:630-639.
  20. Cattivelli L., P. Baldi, C.Crosatti, N.Di Fonzo, P.Faccioli, M. Grossi, Mastrangelo A.M., N. Pecchioni, A.M. Stanca (2002). Chromosome regions and stress related sequences involved in resistance to abiotic stress in Triticeae. Plant Molecular Biology 48(5): 649-665.
  21. Faccioli P., N. Pecchioni, L. Cattivelli, A.M. Stanca, V. Terzi. (2001) Expressed Sequence Tags from cold-acclimatized barley identify novel plant genes. Plant Breeding, 120:497-502.
  22. Terzi V., N. Pecchioni, P. Faccioli, L. Kucera, A.M.Stanca (2001). Phyletic relationships within the genus Hordeum using PCR-based markers. Genetic Resources and Crop Evolution 48: 447-458.
  23. Pozzi C., P. Faccioli, V. Terzi, A.M. Stanca, S. Cerioli, P. Castiglioni, R. Fink, R. Capone, K.J. Müller, G. Bossinger, W. Rohde, F. Salamini (2000). Genetics of mutations affecting the development of a barley floral bract. Genetics, 154(3): 1335-1346.

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The Genomics Research Centre holds a collection of more than one hundred barley mutants.

Our contacts

Genomics Research Centre
Via S. Protaso, 302
29017 Fiorenzuola d'Arda (PC) - ITALY
Phone:
+39 0523 983758
Fax:
+39 0523 983750
E-mail:
gpg@entecra.it
How to find us

We thank Renzo Alberici, Donata Pagani and Gianni Tacconi for setting up the picture collection.